miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|82782958|gb|CV854574.1|CV854574 GCACGAGGGCGCATTGTTGGAGGTGTGTGGTGGTTCTTTACCCTCATCATAATCTCATCCTACACGGCTAACTTAGCTGC
CTTCCTGACGGTTGAGAGGATGGTGTCTCCCATTGAAAGTGCAGAGGATCTTTCCAAGCAAACAGAAATTGCATATGGGA
CATTAGATTCTGGCTCCACTAAAGAGTTTTTTAGGAGATCTAAAATTGCAGTGTTTGATAAAATGTGGACCTATATGAAA
AGTGCAGAGCCATCTGTGTTTGTGAGGACTACAGCAGAAGGGGTAGCTCGAGTACGGAAGTCCAAAGGAAAATATGCCTA
CTTGTTGGAGTCAACCATGAATGAGTACATCGAACAAAGGANACCCTGTGATACCATGAAAGTTGGTGGGAATTTGGATT
CCAAAGGCTACGGCATCGCCACACCTAAAGGATCCTCATTAAAGTGGGTGGAATAGTATAACAATATGCTAAATGTTGTT
ATAGTATCCCACCTACCCTGATGTATCTTTACTGATGTCTATGGTTTGTATAAGGATATGAGGTAACTCTCAAACATTGC
ATTTCAAACATTATATCAAATGAAACTGCCTATAGTGATGATATTTACGAATGTTTGGATACTTCCTTAAACTTTCTGCA
GGTTTTCTAACCATGTAAACTTTCATTTTATTAAATATATTATTTGAACATTCCANTTTTAAGGGATGGTTTCTTATTTC
TTTTCCTTTTTTTTTTTAGATTTGCTTTTCCGTTACTAGCTTAATAGTGTGAGTCTATTTCCTCATACCTTGGTAGAAAC
GTCGCTCTGCTCATGAAACTAAAAGCGAATGGCTGCATTTGAACAGTAAACCGGAGTAA




Most similar to sp|P42262|GRIA2_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P42262|GRIA2_HUMAN Glutamate receptor 2 OS=Homo sapiens GN=GRIA2
            PE=1 SV=3
          Length = 883

 Score =  287 bits (735), Expect = 6e-77
 Identities = 143/146 (97%), Positives = 145/146 (99%)
 Frame = +1

Query: 7    GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKE 186
            GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKE
Sbjct: 619  GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKE 678

Query: 187  FFRRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRXP 366
            FFRRSKIAVFDKMWTYM+SAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQR P
Sbjct: 679  FFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKP 738

Query: 367  CDTMKVGGNLDSKGYGIATPKGSSLK 444
            CDTMKVGGNLDSKGYGIATPKGSSL+
Sbjct: 739  CDTMKVGGNLDSKGYGIATPKGSSLR 764